Preliminary investigation of changes in pathogen presence in the vaginal microbiome in association with age

Subha  Maneesha; Borawake  Arman; Dubli  Kirti; Balasundaram  Preethi; Chaudhari  Rinku; Jayaprakash  Teenus; Kapoor  Raman; Singh  Raja; Kapoor  Anmol; Borkar-Tripathi  Minal

doi:10.18502/ijm.v17i6.20357

Subha Maneesha Department of Genomics, BioAro Inc., Calgary, Alberta, Canada
Borawake Arman Department of Biomedical Engineering, University of British Columbia, Vancouver, British Columbia, Canada
Dubli Kirti Department of Biological Sciences, University of Lethbridge, Lethbridge, Alberta, Canada
Balasundaram Preethi Department of Biological Sciences, University of Calgary, Calgary Alberta, Canada
Chaudhari Rinku Department of Genomics, BioAro Inc., Calgary, Alberta, Canada
Jayaprakash Teenus Department of Genomics, BioAro Inc., Calgary, Alberta, Canada
Kapoor Raman Department of Genomics, BioAro Inc., Calgary, Alberta, Canada
Singh Raja Department of Genomics, BioAro Inc., Calgary, Alberta, Canada
Kapoor Anmol Department of Genomics, BioAro Inc., Calgary, Alberta, Canada
Borkar-Tripathi Minal Department of Genomics, BioAro Inc., Calgary, Alberta, Canada

DOI: https://doi.org/10.18502/ijm.v17i6.20357

Keywords: Vaginal microbiome; Lactobacillus; Aging; Perimenopause; Estrogen

Abstract

Background and Objectives: The vaginal microbiome represents a dynamic ecosystem that undergoes significant trans- formations throughout a woman's lifespan, influenced by hormonal fluctuations and physiological changes. Interpreting pathogen distribution and developing suitable therapeutic care techniques for women's reproductive health depends on an understanding of these age-related patterns. This study aims to thoroughly describe age-related changes in the makeup of the vaginal microbiome and the distribution of pathogenic species.

Materials and Methods: Vaginal swab samples were collected from 29 subjects, categorized into different age groups (A:

15-30 years, B: 31-40 years, C: 41-50 years, and D: 51-60 years old females). Microbiome DNA was extracted from the collected vaginal swabs and shotgun next generation sequencing was performed. Post-sequencing, data was analysed using in-house pipeline followed by statistical analysis using R programming.

Results: The results showed that microbial diversity varied significantly with age. Group C displayed the most severe patho- genic burden; Group A had the highest overall species diversity with 350 bacterial species. Group D displayed the greatest overall relative abundance levels of microorganisms, primarily due to Lactobacillus rhamnosus dominance.

Conclusion: This study shows that the composition of the vaginal microbiome changes fundamentally over the course of a woman's life, with each stage bringing with it its own set of microbial signatures, pathogenic risks, and therapeutic prospects.